李文雄 特聘研究員
實驗室主持人
Dr.李文雄特聘研究員Brown University, Providence, RI, USA Ph.D. |
[ Email住址會使用灌水程式保護機制。你需要啟動Javascript才能觀看它 ] 辦公室: 跨領域 A203 電話: +886-2-2787-2256 |
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研究方向
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最新發表
期刊論文 ( 2016 - 2021 )
- Liu Wen-Yu, Lin Hsin-Hung, Yu Chun-Ping, Chang Chao-Kang, Chen Hsiang-June, Lin Jinn-Jy, Lu Mei-Yeh Jade, Tu Shih-Long, Shiu Shin-Han, Wu Shu-Hsing, Ku Maurice S. B., Li Wen-Hsiung*, 2020, “Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growth”, Proceedings of the National Academy of Sciences, 117(35) 21747-21756. Link
- Vu Trieu-Duc, Iwasaki Yuki, Shigenobu Shuji, Maruko Akiko, Oshima Kenshiro, Iioka Erica, Huang Chao-Li, Abe Takashi, Tamaki Satoshi, Lin Yi-Wen, Chen Chih-Kuan, Lu Mei-Yeh, Hojo Masaru, Wang Hao-Ven, Tzeng Shun-Fen, Huang Hao-Jen, Kanai Akio, Gojobori Takashi, Chiang Tzen-Yuh, Sun H. Sunny, Li Wen-Hsiung, Okada Norihiro, 2020, “Behavioral and brain- transcriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens”, PLOS Genetics, 16(6) e1008831. (SCIE) (IF: 5.175; SCIE ranking: 14.6%) Link
- Lee MH, Hsu TL, Lin JJ, Lin YJ, Kao YY, Chang JJ, Li WH*, 2020, “Constructing a human complex type N-linked glycosylation pathway in Kluyveromyces marxianus.”, PloS one, 15(5), e0233492. (SCIE) (IF: 2.74; SCIE ranking: 38%) Link
- Anandharaj M, Lin YJ, Rani RP, Nadendla EK, Ho MC, Huang CC, Cheng JF, Chang JJ, Li WH*, 2020, “Constructing a yeast to express the largest cellulosome complex on the cell surface.”, Proceedings of the National Academy of Sciences of the United States of America, 117(5), 2385-2394. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Wang WF, Lu MJ, Cheng TR, Tang YC, Teng YC, Hwa TY, Chen YH, Li MY, Wu MH, Chuang PC, Jou R, Wong CH, Li WH*, 2020, “Genomic Analysis of Mycobacterium tuberculosis Isolates and Construction of a Beijing Lineage Reference Genome.”, Genome biology and evolution, 12(2), 3890-3905. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
- Liu HL, Chang JJ, Thia C, Lin YJ, Lo SC, Huang CC, Li WH*, 2019, “Characterizing an engineered carotenoid-producing yeast as an anti-stress chassis for building cell factories.”, Microbial cell factories, 18(1), 155. (SCIE) (IF: 4.187; SCIE ranking: 46.2%,84.8%) Link
- Wang L, Zhao L, Zhang X, Zhang Q, Jia Y, Wang G, Li S, Tian D, Li WH*, Yang S, 2019, “Large-scale identification and functional analysis of NLR genes in blast resistance in the Tetep rice genome sequence.”, Proceedings of the National Academy of Sciences of the United States of America, 116(37), 18479-18487. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Gomez Luciano LB, Jason Tsai I, Chuma I, Tosa Y, Chen YH, Li JY, Li MY, Jade Lu MY, Nakayashiki H, Li WH*, 2019, “Blast fungal genomes show frequent chromosomal changes, gene gains and losses, and effector gene turnover.”, Molecular biology and evolution, 36(6),1148-1161. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Chang YM, Lin HH, Liu WY, Yu CP, Chen HJ, Wartini PP, Kao YY, Wu YH, Lin JJ, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH*, 2019, “Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes.”, Proceedings of the National Academy of Sciences of the United States of America, 116(8), 3091-3099. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Lin JJ, Bhattacharjee MJ, Yu CP, Tseng YY, Li WH*, 2019, “Many human RNA viruses show extraordinarily stringent selective constraints on protein evolution.”, Proceedings of the National Academy of Sciences of the United States of America, 116(38), 19009-19018. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Huang CJ, Lu MY, Chang YW, Li WH*, 2018, “Experimental Evolution of Yeast for High Temperature Tolerance.”, Molecular biology and evolution, 35(8), 1823-1839. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Huang J, Li J, Zhou J, Wang L, Yang S, Hurst LD, Li WH, Tian D, 2018, “Identifying a large number of high-yield genes in rice by pedigree analysis, whole-genome sequencing, and CRISPR-Cas9 gene knockout.”, Proceedings of the National Academy of Sciences of the United States of America, 115(32), E7559-E7567. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Pi HW, Anandharaj M, Kao YY, Lin YJ, Chang JJ, Li WH, 2018, “Engineering the oleaginous red yeast Rhodotorula glutinis for simultaneous beta-carotene and cellulase production.”, Scientific reports, 8(1), 10850. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
- Chang JJ, Anandharaj M, Ho CY, Tsuge K, Tsai TY, Ke HM, Lin YJ, Ha Tran MD, Li WH*, Huang CC, 2018, “Biomimetic strategy for constructing Clostridium thermocellum cellulosomal operons in Bacillus subtilis.”, Biotechnology for biofuels, 11, 157. (SCIE) (IF: 4.815; SCIE ranking: 46.2%,84.8%) Link
- Lee MH, Lin JJ, Lin YJ, Chang JJ, Ke HM, Fan WL, Wang TY, Li WH*, 2018, “Genome-wide prediction of CRISPR/Cas9 targets in Kluyveromyces marxianus and its application to obtain a stable haploid strain.”, Scientific reports, 8(1), 7305. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
- Chang JJ, Lin YJ, Lay CH, Thia C, Wu YC, Hou YH, Huang CC, Li WH, 2018, “Constructing a cellulosic yeast host with an efficient cellulase cocktail.”, Biotechnology and bioengineering, 115(3), 751-761. (SCIE) (IF: 4.002; SCIE ranking: 25%) Link
- Wu P, Yan J, Lai YC, Ng CS, Li A, Jiang X, Elsey RM, Widelitz R, Bajpai R, Li WH, Chuong CM, 2018, “Multiple Regulatory Modules Are Required for Scale-to-Feather Conversion.”, Molecular biology and evolution, 35(2), 417-430. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Ke HM, Prachumwat A, Yu CP, Yang YT, Promsri V, Liu KF, Lo CF, Lu MYJ, Lai MC, Tsai IJ, Li WH*, 2017, “Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade”, Scientific Reports, 7, 41394. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
- Su SC, Lin CW, Liu YF, Fan WL, Chen MK, Yu CP, Yang WE, Su CW, Chuang CY, Li WH, Chung WH, Yang SF, 2017, “Exome Sequencing of Oral Squamous Cell Carcinoma Reveals Molecular Subgroups and Novel Therapeutic Opportunities.”, Theranostics, 7(5), 1088-1099. (SCIE) (IF: 8.579; SCIE ranking: 7.2%) Link
- Chang JJ, Lin YJ, Lay CH, Thia C, Wu YC, Hou YH, Li WH*, 2017, “Constructing a Cellulosic Yeast Host with an Efficient Cellulase Cocktail”, BIOTECHNOLOGY AND BIOENGINEERING, 115(3), 751-761. (SCIE) (IF: 4.002; SCIE ranking: 25%) Link
- Huang CF, Yu CP, Wu YH, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH*, 2017, “Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves.”, Proceedings of the National Academy of Sciences of the United States of America, 114(33), E6884-E6891. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Chen CK, Yu CP, Li SC, Wu SM, Lu MJ, Chen YH, Chen DR, Ng CS, Ting CT, Li WH*, 2017, “Identification and evolutionary analysis of long non-coding RNAs in zebra finch.”, BMC genomics, 18(1), 117. (SCIE) (IF: 3.594; SCIE ranking: 27.6%,32%) Link
- Lin YJ, Chang JJ, Lin HY, Thia C, Kao YY, Huang CC, Li WH*, 2017, “Metabolic engineering a yeast to produce astaxanthin.”, Bioresource technology, 245(Pt A), 899-905. (SCIE) (IF: 7.539; SCIE ranking: 7.7%,7.7%,11.6%) Link
- Wu P, Yan J, Lai YC, Ng CS, Li A, Jiang X, Lin JJ, Elsey R, Widelitz R, Bajpai R, Li WH, Chuong CM, 2017, “Multiple regulatory modules are required for scale-to-feather conversion”, MOLECULAR BIOLOGY AND EVOLUTION, 35(2), 417-430. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Lin JJ, Wang FY, Li WH*, Wang TY, 2017, “The rises and falls of opsin genes in 59 ray-finned fish genomes and their implications for environmental adaptation.”, Scientific reports, 7(1), 15568. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
- Li H, Xiang-Yu J, Dai G, Gu Z, Ming C, Yang Z, Ryder OA, Li WH*, Fu YX, Zhang YP, 2016, “Large numbers of vertebrates began rapid population decline in the late 19th century.”, Proceedings of the National Academy of Sciences of the United States of America, 113(49), 14079-14084. (SCIE) (IF: 9.412; SCIE ranking: 11.3%) Link
- Tsai KJ, Lu MJ, Yang KJ, Li M, Teng Y, Chen S, Ku MS, Li WH*, 2016, “Assembling the Setaria italica L. Beauv. genome into nine chromosomes and insights into regions affecting growth and drought tolerance.”, Scientific reports, 6, 35076. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
- Bhattacharjee MJ, Yu CP, Lin JJ, Ng CS, Wang TY, Lin HH, Li WH*, 2016, “Regulatory Divergence among Beta-Keratin Genes during Bird Evolution.”, Molecular biology and evolution, 33(11), 2769-2780. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Chen CK, Ng CS, Wu SM, Chen JJ, Cheng PL, Wu P, Lu MY, Chen DR, Chuong CM, Cheng HC, Ting CT, Li WH*, 2016, “Regulatory Differences in Natal Down Development between Altricial Zebra Finch and Precocial Chicken.”, Molecular biology and evolution, 33(8), 2030-2043. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
- Mei-Ju May Chen, Li-Kai Chen, Yu-Shing Lai, Yu-Yu Lin, Dung-Chi Wu, Yi-An Tung, Kwei-Yan Liu, Hsueh-Tzu Shih, Yi-Jyun Chen, Yan-Liang Lin, Li-Ting Ma, Jian-Long Huang, Po-Chun Wu, Ming-Yi Hong, Fang-Hua Chu, June-Tai Wu, Wen-Hsiung Li* and Chien-Yu Chen*, 2016, “Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster”, BMC Genomics, 17, 220. (SCIE) (IF: 3.594; SCIE ranking: 27.6%,32%) Link
- Huang CF, Chang YM, Lin JJ, Yu CP, Lin HH, Liu WY, Yeh S, Tu SL, Wu SH, Ku MS, Li WH*, 2016, “Insights into the regulation of C leaf development from comparative transcriptomic analysis.”, Current opinion in plant biology, 30, 1-10. (SCIE) (IF: 8.356; SCIE ranking: 3.4%) Link
- Yu CP, Lin JJ, Li WH*, 2016, “Positional distribution of transcription factor binding sites in Arabidopsis thaliana.”, Scientific reports, 6, 25164. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link